Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955172.1_cds_XP_016493778.1_83851
CDS Infomation

[gene=LOC107813081] [db_xref=GeneID:107813081] [protein=putative F-box/LRR-repeat protein At5g02930 isoform X2] [protein_id=XP_016493778.1] [location=complement(join(17124..17480,18073..18237,18574..19458))] [gbkey=CDS]
Sequence

ATGATTCAAATTCTCTCTCTTTTGCCAACCAAGGAGGCATTCAGAAGCTGTATTCTATCA
AAAAGGTGGCAGTATCTCTGTACTTCAGTTTATAATCTAAATTTCACTGACGCTGATAAT
ATGCCACAAGAAGCCTTTATATCCTATGTAGACTCTGCCTTAGCTCGTTGCACTTCTTCC
AAAATCAAAATATTCCAGCTCACTTTCGGTTGGCAGCATGTTTACTGGTCGCAATACAGC
CAATGGCTGGCATTTGCTGTCGAAAAAGAAACGGAACATGTTGAATTGAAGTCATTTGGT
GATGATTATGACATTTTCACATTGCCTCAATTCATCTACACTTGTTCGTCGTTGATAACA
TTGAAATTGATCCGCTGTGCACTTGATAAAGAAGTAATTATAGCGTGGAAGTCGCTAAAG
AGCTTAGTGTTGATCGATATGGTGTTAGATGGTGACGATATTGTGAACCTACTCTCAGGT
TCTCCTGCTTTGGAAACTTTGGAATTTAATGTATGCATGGGTTTCCGTCGTCTCGAAATT
AGTTCGTCAAATTTGAAGAGACTAAATATTAAAAGCTGGAGGTTGTTGGATGTCGAAGAT
GATCATTCCTTGGAAATTTTTGCGCCATATCTTCAGCATTTGGAGATCTCTGGAAGTATT
TCTGATCTCAAGTGCAGGCTACTAAATGTATCCTCTCTGGTCAATGCTAAACTTACTTTC
AACAATGATTGCGAAAAAGATATTCAGGATTGGAATGGATATCATGTCGATGATGCAGTG
GACAGTTGTCGTGATTATCATCAATCATTTATCATCGTCGTGCAAGATTATCTTCAAAAG
TTAAGTAATGTGACCAACCTCACAATTGGAACATGGTTAACAGAGGTCCTGTGCATGCTG
CAGCTCGAAGAGGTGCCAATTCCAGAACTAAAATGCAAATATCTAACACTAAAGTTACAT
TTAAAAAAGCTTAATTTGTGTGGGGTAGCTAGCCTTTTGCGAGCCTCGCCTCATGTGGAG
ACACTCAACATAGACGTGGCAACGATGAGTCTTCATGATTCCTTCTGTCACTTTAAGTTA
AGATATTTGGCCAAAGGAGATAATGTTGATTTGCGGATATGGACTTCAAGCTTTGTGTTT
CCCAGCCTCAAGAATGTTAAGATTGTCAACTCCTTGGGGGTGTGCTTGAAGGATCATTTC
AAACCGGGCTGTGACAAGCTTTTCGAACTTTCAAAAATTCTGTTAAAGAACGCGACTGTT
TTGGAGAAGTTCTTTATCGTATCAAAGAAAAGAAAGTGCAGGAGATGTTCAACGGACTGT
GTGTCCCAATATTTTCTTCAATTGGCTGAGAAATTGTTAGGTTGTCCAAGATCCTCCACC
AATTCTGTGATTCTCTTCCAAGAGTGA

Peptide Sequence

PEP ID

XP_016493778.1
PEP Infomation

PREDICTED: putative F-box/LRR-repeat protein At5g02930 isoform X2 [Nicotiana tabacum]
Sequence

MIQILSLLPTKEAFRSCILSKRWQYLCTSVYNLNFTDADNMPQEAFISYVDSALARCTSS
KIKIFQLTFGWQHVYWSQYSQWLAFAVEKETEHVELKSFGDDYDIFTLPQFIYTCSSLIT
LKLIRCALDKEVIIAWKSLKSLVLIDMVLDGDDIVNLLSGSPALETLEFNVCMGFRRLEI
SSSNLKRLNIKSWRLLDVEDDHSLEIFAPYLQHLEISGSISDLKCRLLNVSSLVNAKLTF
NNDCEKDIQDWNGYHVDDAVDSCRDYHQSFIIVVQDYLQKLSNVTNLTIGTWLTEVLCML
QLEEVPIPELKCKYLTLKLHLKKLNLCGVASLLRASPHVETLNIDVATMSLHDSFCHFKL
RYLAKGDNVDLRIWTSSFVFPSLKNVKIVNSLGVCLKDHFKPGCDKLFELSKILLKNATV
LEKFFIVSKKRKCRRCSTDCVSQYFLQLAEKLLGCPRSSTNSVILFQE

Transcript Sequence

Gene sequence data has not been registered.